Match and Identification

To match and identify rice varieties based on 38 barcodeSNPs for a provided hapmap file. The output is ordered by Number of different sites (NDS) in the format of “Accession Name (NDS,group,origin)”. eg. B001(0,TeJ,China)

Note: Aro, Aromatic; Aus, Aus; Ind, Indica; TeJ, Temperate japonica; TrJ, Tropical japonica
#Chrom POS REF ALT B001 B002_1 B004_2 B005_3
chr01 26460884 G A GG GA GA GA
chr01 33149353 T C TT TT TC TC